Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139866629:139866645:[+] chr10:123985973:123985987:[+] nonBSJ supported CDS

circRNA 5':AGCAUCUCCAGGGCUUC 3'


            || || ||:||:


target  3':CCGC--AGCCCCUGAGA 5'

 -9.20 2 RIC-seq
chrX:139866629:139866657:[+] chr10:123923452:123923479:[+] nonBSJ supported CDS

circRNA 5':AGCAUCUCCAGGGCUUCCAGCAUCUGCUC 3'


            || ||||| | ||| :||


target  3':GCGACCGAC-CCCGACCGACGUCCCUGAC 5'

 -13.40 15 RIC-seq
chrX:139866674:139866693:[+] chr10:123985971:123985986:[+] nonBSJ supported CDS

circRNA 5':ACGUCUUCCAGCAUCUCUGU 3'


            |||| |||||


target  3':CGCAGCCCCU----GAGACU 5'

 -8.70 17 RIC-seq
chrX:139866730:139866751:[+] chr10:123923458:123923482:[+] nonBSJ supported CDS

circRNA 5':AGUCUUCCAUCAA--CUGGCU-CAA 3'


            ||| |||||| ||


target  3':CCAGCGACCGACCCCGACCGACGUC 5'

 -11.20 1 RIC-seq