Gene structure and interaction sites

5'UTR

CDS

3'UTR

Exon

circRNA binding site

Detailed information

CircRNA interaction region	Target interaction region	Interaction type	Target element	RNA duplex	MFE (kcal/mol)	Reads	Methods
chrX:139866622:139866687:[+]	chr2:27356526:27356583:[-]	nonBSJ supported	CDS	circRNA 5': GUCUUC------CAGCAUCUCCAGGGC-UUCCAGCAUCUGCUCGUCUUCCAACAUCUCCACGUCUUCCAGCAU 3' \|\|\| \|\|\|\|\| :\|\|\| :\|\| \|\|\| \|\|:\|:\| \|\| \|\|\| \| \|\|\| target 3':ACAGUACCCUCACGUCGUUCC---UCCGUGAGUUCG----CGGGUAAUUA---------GUCGAGAUCGACGUC 5'	-25.30	1	RIC-seq
chrX:139866653:139866712:[+]	chr2:27356513:27356581:[-]	nonBSJ supported	CDS	circRNA 5':UGCUCGUCUUCCAACAUCUCCACGUCUUC------CAGCAU-------CUCU-GUGUCUUC----CAGCAUCUUCAUG 3' \|\|:\|\|\| \|\|\|\| \|\|\| \|\|\|\|\| \|\|\| \|:\|:\|: \|\|\|\| \|\|\| \|\| target 3': CGGGCAC--------AGAGACACAGUACCCUCACGUCGUUCCUCCGUGAGUUCGCGGGUAAUUAGUCG-AGAUCGACG 5'	-27.70	1	RIC-seq