5'UTR
CDS
3'UTR
Exon
circRNA binding site
| CircRNA interaction region | Target interaction region | Interaction type | Target element | RNA duplex | MFE (kcal/mol) | Reads | Methods |
| chrX:139866470:139866483:[+] | chr1:84385483:84385495:[-] | nonBSJ supported | CDS |
circRNA 5':AAAGGUAUGUCUUC 3' ||| ||| ||| target 3':GUUCAUUAC-GAAA 5' |
-6.20 | 1 | RIC-seq |
| chrX:139866499:139866549:[+] | chr1:84399291:84399323:[-] | nonBSJ supported | CDS |
circRNA 5':UUCCAGAAAAUCCACGUCUUCCAACCAAGCCAUGUCUUCCAGAAA--AUCCAC 3' |||||| ||||||| ||| ||||| target 3':GAGGUCU--------------------UCGGUACCGAAAUCAAAAGAUAGGUU 5' |
-22.10 | 26 | RIC-seq |
| chrX:139866523:139866537:[+] | chr1:84385482:84385495:[-] | nonBSJ supported | CDS |
circRNA 5':CCAAGCCAUGUCUUC 3' |||| ||| ||| target 3':AGUUCAUUAC-GAAA 5' |
-6.60 | 14 | RIC-seq |
| chrX:139866524:139866549:[+] | chr1:84399296:84399323:[-] | nonBSJ supported | CDS |
circRNA 5':CAAGCCAUGUCUUCCAGAAA--AUCCAC 3' |||||||| ||| ||||| target 3':CUUCGGUACCGAAAUCAAAAGAUAGGUU 5' |
-17.00 | 1 | RIC-seq |