Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139865668:139865682:[+] chr15:58974393:58974410:[-] nonBSJ supported CDS

circRNA 5':UCCAUGUCU---UCCAGA 3'


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target  3':UGGUAUUUAUACAGGUCA 5'

 -10.10 1 RIC-seq
chrX:139866723:139866759:[+] chr15:58971408:58971462:[-] nonBSJ supported CDS

circRNA 5':ACUACC-C--------------------AGUCUUCCAUCAACUGGCUCAAUAUCCAUG 3'


            |:||| | |:||||||||||| |::| |:|||||


target  3':CGGUGGUGCUCAGACCUACUUAGGAAGUUUAGAAGGUAGUU-AUUGUC---UGGGUACC 5'

 -29.70 1 RIC-seq
chrX:139866729:139866759:[+] chr15:58971435:58971462:[-] nonBSJ supported CDS

circRNA 5':CAGUCUUCCAUCAACUGGCUCAAUAUCCAUG 3'


            |:||||||||||| |::| |:|||||


target  3':UUUAGAAGGUAGUU-AUUGUC---UGGGUACC 5'

 -26.80 1 RIC-seq