Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139866408:139866422:[+] chr11:102102186:102102200:[+] nonBSJ supported 3UTR

circRNA 5':CUUCCAGCCUACUUG 3'


            ||||||| |||:


target  3':AAAGGUCGAUUGAGU 5'

 -15.40 1 RIC-seq
chrX:139866408:139866440:[+] chr11:102102159:102102200:[+] nonBSJ supported 3UTR

circRNA 5':CUUCCAGCCUACUU-----------GUG-UCU-UCCAACAAAGGUA 3'


            ||||||| |||: ||: ||| |||| |||


target  3':AAAGGUCGAUUGAGUUUUGGAAUAUCAUAAGAUAGGUC----CCAG 5'

 -20.80 1 RIC-seq