5'UTR
CDS
3'UTR
Exon
circRNA binding site
| CircRNA interaction region | Target interaction region | Interaction type | Target element | RNA duplex | MFE (kcal/mol) | Reads | Methods |
| chrX:139865710:139865737:[+] | chr11:71727498:71727529:[-] | nonBSJ supported | CDS |
circRNA 5': GUCUUCCAGUAAAUCUA---GUUCUUCCAGA 3' |||:| |||: |||||||||| target 3':AUAGGACGUCGACCCUGUUCACAAGAAGGUCG 5' |
-22.20 | 2 | RIC-seq |
| chrX:139866392:139866418:[+] | chr11:71715123:71715148:[-] | nonBSJ supported | CDS |
circRNA 5':UCCAUCAAAUUAAUGUCUUCCAGCCUA 3' ||||| |:| :|:| |||||| target 3':CGGUAGC-UGACCGCGGCCAGUCGGAC 5' |
-17.90 | 1 | RIC-seq |
| chrX:139866641:139866690:[+] | chr11:71721831:71721885:[-] | nonBSJ supported | CDS |
circRNA 5':GCUUCCAGCAUCUGCU----CGUCUU-CCAACAUC-UCCACGUCUUCCAGCAUCUC 3' ||| |||| |||||| |::||| | || ||| |||| ||| target 3':GGAA-GUCGAAGACGACGACGUGGAACGACCGAACCAGUCUCAGUCGGUCAAAGAA 5' |
-27.30 | 2 | RIC-seq |
| chrX:139866689:139866709:[+] | chr11:71727454:71727478:[-] | nonBSJ supported | CDS |
circRNA 5':UCUGU-----GUCUUCCAGCAUCUUC 3' |||: :|| :||||||:||: target 3': GACGUUCUGUAGUGGGUCGUGGAGC 5' |
-21.30 | 1 | RIC-seq |
| Interaction region | CircRNA/target | Mutation ID | Position | Variant | Associated trait | Resource |
| chr11:71727498:71727529:[-] | target | - | chr11:71727510-71727511 | G>T | LICA-CN | ICGC |