Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139866662:139866696:[+] chr6:3123965:3123996:[+] nonBSJ supported CDS

circRNA 5':UCC-AACAUCUCCACGUCUUCCAGCAUCUCUGUGUC 3'


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target  3':UGGAUUGUAG-GGUCCUUCA--UCGUCCUGACGCA 5'

 -22.20 1 RIC-seq
chrX:139866662:139866711:[+] chr6:3123951:3123996:[+] nonBSJ supported CDS

circRNA 5':UCC-AACAUCUCCACGUCUUCCAGCAUCUCUGUG---UCUUCCAGCAUCUUCAU 3'


            || |||||| ||| | |||| |||:| |||:|| |||:||


target  3':UGGAUUGUAG-GGUCCUUCA--UCGUCCUGACGCACUAGAGGG----AGAGGU 5'

 -32.70 1 RIC-seq