Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139866331:139866360:[+] chr6:3155882:3155902:[-] nonBSJ supported CDS

circRNA 5':CAGGUCUUCCAGGAAAUCCGUGUCUUCCAG 3'


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target  3':UUCUAGA----CC----GGCUUCCCAGGU 5'

 -12.30 2 RIC-seq
chrX:139866331:139866362:[+] chr6:3155882:3155905:[-] nonBSJ supported CDS

circRNA 5':CAGGUCUUCCAGGAAAUCCGUGUCUUCCAG-CA 3'


            ||:||| || ||| ||||| |


target  3':UUCUAGA----CC----GGCUUCCCAGGUCUG 5'

 -15.40 25 RIC-seq