Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139865422:139865467:[+] chr6:41568066:41568102:[+] nonBSJ supported 3UTR

circRNA 5':CUUCCAGAUAAUCCUGA-GCUUCCAGAAAAUCCACAUCUUCCAG-ACA 3'


            |||||| || ||| ||| ||||||| ||:|||| ||


target  3': AAGGUCGA----GAAAACGA---UCU--UAGGUGU-GAGGGUCGUGC 5'

 -30.60 1 RIC-seq
chrX:139865422:139865467:[+] chr6:41568066:41568103:[+] nonBSJ supported 3UTR

circRNA 5':CUUCCAGAUAAUCCUGA-GCUUCCAGAAAAUCCACAUCUUCCAG-ACA 3'


            |||||| || ||| ||| ||||||| ||:|||| ||


target  3':AAAGGUCGA----GAAAACGA---UCU--UAGGUGU-GAGGGUCGUGC 5'

 -31.50 22 RIC-seq