Gene structure and interaction sites

5'UTR

CDS

3'UTR

Exon

circRNA binding site

Detailed information

CircRNA interaction region	Target interaction region	Interaction type	Target element	RNA duplex	MFE (kcal/mol)	Reads	Methods
chrX:139866328:139866368:[+]	chr9:38409141:38409185:[-]	nonBSJ supported	3UTR	circRNA 5':AUCCAGGUCUUC------CAGGAA-AUCCGUGUCUUCCAGCAAAUCCA 3' \|\|\|\|: \|\|\|\|\| \|\| :\|\| \|\|\|\|\|\| :\| \|\|\| target 3':AAGGUUGAGAAGUACUUCGUGUUUCUAGGCAAUAAAC--UGAAAAGG 5'	-24.90	1	RIC-seq
chrX:139866328:139866369:[+]	chr9:38409141:38409187:[-]	nonBSJ supported	3UTR	circRNA 5':AUCCAGGUCUUC------CAGGAA-AUCCGUGUCUUCCAGCAAAUCCAC 3' \|\|\|\|: \|\|\|\|\| \|\| :\|\| \|\|\|\|\|\| :\| \|\|\|\| target 3':AAGGUUGAGAAGUACUUCGUGUUUCUAGGCAAUAAAC--UGAAAAGGUA 5'	-25.40	1	RIC-seq

Variants map to interaction

Interaction region	CircRNA/target	Mutation ID	Position	Variant	Associated trait	Resource
chr9:38409141:38409185:[-]	target	-	chr9:38409170-38409171	G>A	EOPC-DE	ICGC
chr9:38409141:38409187:[-]	target	-	chr9:38409170-38409171	G>A	EOPC-DE	ICGC