Gene structure and interaction sites

5'UTR

CDS

3'UTR

Exon

circRNA binding site

Detailed information

CircRNA interaction region	Target interaction region	Interaction type	Target element	RNA duplex	MFE (kcal/mol)	Reads	Methods
chrX:139866029:139866055:[+]	chr9:35812997:35813022:[-]	nonBSJ supported	3UTR	circRNA 5':CUUCCCAACA-AUCCAAGUCUUCCGGAU 3' \|\|\|\|\| \|\|\|\|\|\|\|: \|\|\|:\|\| target 3': AAGGGAAAGGUAGGUUCGU-AGGUCUC 5'	-26.00	1	RIC-seq
chrX:139866029:139866081:[+]	chr9:35812997:35813067:[-]	nonBSJ supported	3UTR	circRNA 5':CUUCCCAACA-AUCCAAGUCUUCCGGAUAAUUUGG-GUCUU---------------------CCUGAAAAUCUACG 3' \|\|\|\|\| \|\|\|\|\|\|\|: \|\|\|:\|\| \|:\|\|\| \|\|\|:\| \|\|\|\| \|:\|\| target 3': AAGGGAAAGGUAGGUUCGU-AGGUCUC--AGACCACAGGAAAUUAGUCAACCGUCCAAGUUGGACCUCC-GGUGA 5'	-41.10	3	RIC-seq

Variants map to interaction

Interaction region	CircRNA/target	Mutation ID	Position	Variant	Associated trait	Resource
chr9:35812997:35813067:[-]	target	-	chr9:35813062-35813063	G>T	LICA-CN	ICGC