Gene structure and interaction sites

5'UTR

CDS

3'UTR

Exon

circRNA binding site

Detailed information

CircRNA interaction region	Target interaction region	Interaction type	Target element	RNA duplex	MFE (kcal/mol)	Reads	Methods
chrX:139865801:139865852:[+]	chr9:132595946:132595987:[-]	nonBSJ supported	CDS	circRNA 5':AGUGUCUUCCAGAAAGAAAUCCAGGUCUUCCAGUCAGUCAGUGUCUUCCAGA 3' \|\| \|\|:\|\| \|\| \|\|\|:\|\|\| :\|\|\|: \|\| \|:\| \|\|\| target 3':CCAGAGGAGAACAU------GGAAGAGAGGGU-GGUCGUUC-CGGU--GUCG 5'	-28.90	1	RIC-seq
chrX:139865815:139865858:[+]	chr9:132593151:132593204:[-]	nonBSJ supported	CDS	circRNA 5':AGAAAUCCAGGUCUUCCA-------GUCAGUCAGUGUCUUCCA-GAAAA-AUC 3' \|\| :\|\|\|\|\|\|\|: \|\| \|:\|\| \|\|\|\|::\|\|\| \|\|\|\| \|\|\| target 3':GCUACGGGUCCAGGUGGAGUCCUUACGGUGAGUCGUAGACCAACCUUUCGUAGA 5'	-35.90	1	RIC-seq