Gene structure and interaction sites

5'UTR

CDS

3'UTR

Exon

circRNA binding site

Detailed information

CircRNA interaction region	Target interaction region	Interaction type	Target element	RNA duplex	MFE (kcal/mol)	Reads	Methods
chrX:139866456:139866509:[+]	chr10:26534855:26534923:[+]	nonBSJ supported	CDS	circRNA 5':GUACGUCU--UCCAACAAAGGUAUGUCU--UCCAA-CA--AAGGUA-CGUCUUCC--------AGAAAAU 3' \|\|\|:\| \|\| \| \|: \|\|\|\|\| \|\|\|\|\| \| \|\|\|\|: \|: \|\|:\|\| \|\|\|\|\|\| target 3':AGUGUAAAUUAGUCUUAGUGCG-ACAGACAAGGUUAGGGAUUCCGACGUCGAGGGAAGAACUCUCUUUUU 5'	-24.50	14	RIC-seq
chrX:139866457:139866509:[+]	chr10:26534855:26534931:[+]	nonBSJ supported	CDS	circRNA 5':UACGUCUUCCAACAAAG------------GUAUGUCU--UCCAA-CA--AAGGUA-CGUCUUCC--------AGAAAAU 3' \|\| \|\|\|: \|\|\| \|: \|\|\|\|\| \|\|\|\|\| \| \|\|\|\|: \|: \|\|:\|\| \|\|\|\|\|\| target 3': UGGAGAGUAGUGUAAAUUAGUCUUAGUGCG-ACAGACAAGGUUAGGGAUUCCGACGUCGAGGGAAGAACUCUCUUUUU 5'	-26.00	2	RIC-seq