Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139865339:139865385:[+] chr7:2697997:2698027:[+] nonBSJ supported CDS

circRNA 5':GGGUUUCCGAUGGCAC--CUGUGUCAAGGUCUUCCAACAACUCCGGGUC 3'


            ||:| || ||| ||||: | ||| || |||:


target  3':AUCGACG---ACGGUGUCGACAU-G-UCC-GA------------CCCGU 5'

 -18.30 1 RIC-seq
chrX:139865339:139865385:[+] chr7:2697997:2698041:[+] nonBSJ supported CDS

circRNA 5':GGGUUUCCGAUGGCAC--CUG-UGUCAAGGUCUUCCAACAACUCCGGGUC 3'


            |||:|| || | ||| ||:|| :| || ||| |||:


target  3':ACCAGAGUG-ACGGCAUCGACGACGGUGUC-GACA--UGUCCGA-CCCGU 5'

 -23.90 1 RIC-seq