Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139865371:139865393:[+] chr2:232196584:232196610:[+] nonBSJ supported CDS

circRNA 5': CAACA---ACUCCG-GGUCUUCCAGCG 3'


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target  3':GGGGGUCCAUGAGGCACCAGUCU-UCGA 5'

 -20.60 2 RIC-seq
Variants map to interaction
Interaction region CircRNA/target Mutation ID Position Variant Associated trait Resource
chr2:232196584:232196610:[+] target - chr2:232196597-232196598 G>A LAML-KR|LICA-CN ICGC