Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139866449:139866501:[+] chr1:183043420:183043481:[+] nonBSJ supported Intron

circRNA 5':AACAAAGGUAC--GUC---------UUCCAACAAA--GGUAUGUCUUCCAACAAAGGUACGUCUUC 3'


            ||| |:|| ||| |||||| :|:|| |||| |||||||::


target  3':AUGUGUACGUGUACAGUGAGAAUCUAAGGUUUAUGAGUCGUA---AAGGACUCAA-CAUGCAGGGA 5'

 -29.30 1 RIC-seq
chrX:139866491:139866501:[+] chr1:183043420:183043430:[+] nonBSJ supported Intron

circRNA 5':GGUACGUCUUC 3'


            |||||||::


target  3':ACAUGCAGGGA 5'

 -12.80 1 RIC-seq