Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139865918:139865963:[+] chr1:180000469:180000504:[+] nonBSJ supported CDS

circRNA 5':GUCUUCCAGCCAAUAUAUGUCUUCCUGAAGAUCCACGUCUUCCAGA 3'


            ||:|| ||| | || || ||||| || ||||||


target  3':AAGGAGUA--GUUCUUCACUCAA-GACUUGUA-------AAGGUCA 5'

 -16.50 14 RIC-seq
chrX:139865936:139865958:[+] chr1:180000481:180000504:[+] nonBSJ supported CDS

circRNA 5':GUCUUCCUGAAGAUCCACG-UCUU 3'


            ||:|| | |||| |||


target  3':AAGGAGUAGUUCUUCACUCAAGAC 5'

 -9.80 1 RIC-seq