5'UTR
CDS
3'UTR
Exon
circRNA binding site
| CircRNA interaction region | Target interaction region | Interaction type | Target element | RNA duplex | MFE (kcal/mol) | Reads | Methods |
| chrX:139866122:139866138:[+] | chr1:229678087:229678103:[-] | nonBSJ supported | CDS |
circRNA 5':CCAAUGGCCUCCAGGUC 3' ||| || ||||:| target 3':UGUUUCCACCGGUCUAA 5' |
-11.00 | 1 | RIC-seq |
| chrX:139866125:139866164:[+] | chr1:229678061:229678102:[-] | nonBSJ supported | CDS |
circRNA 5':AUGGC-CUCCAGGUCUUCCAGACUAUC--CAUGUCUU-CCAGAA 3' ||:| || |||: ||| || || ||||| target 3':AACUGUGACCUCCGU--GGUGCGAGUUUUGUUUCCACCGGUCUA 5' |
-18.80 | 40 | RIC-seq |
| chrX:139866126:139866164:[+] | chr1:229678071:229678102:[-] | nonBSJ supported | CDS |
circRNA 5':UGGCCUCCAGGUCUUCCAGACUAUCCAUGUCUUCCAGAA 3' ||| ||| |: || |:|| || ||||| target 3':UCCGU-GGUGCG--AGUUUUGUUUC---CACC-GGUCUA 5' |
-18.40 | 1 | RIC-seq |
| chrX:139866159:139866195:[+] | chr1:229678051:229678084:[-] | nonBSJ supported | CDS |
circRNA 5':CCAGAAAAUCCUUGUCUUCCCUUAAAUCUAUAGCUUC 3' ||| ||| ||| | |:|: |||: target 3':UGUCG-UUACUAACUGUGACCUCCGU-GGUG-CGAGU 5' |
-8.40 | 1 | RIC-seq |
| chrX:139866180:139866193:[+] | chr1:229678045:229678056:[-] | nonBSJ supported | CDS |
circRNA 5':UUAAAUCUAUAGCU 3' ||||| ||:||| target 3': AUUUA-AUGUCGU 5' |
-7.30 | 1 | RIC-seq |