5'UTR
CDS
3'UTR
Exon
circRNA binding site
| CircRNA interaction region | Target interaction region | Interaction type | Target element | RNA duplex | MFE (kcal/mol) | Reads | Methods |
| chrX:139865644:139865685:[+] | chr12:65137044:65137071:[-] | nonBSJ supported | CDS |
circRNA 5':AUCAAAUACAGAUCUUCCAGCUAAUCCAUGUCUUCCAGAAAA 3' ||||| || || ||| |||||||| target 3':GAGUUUCAACCU-GA-------------ACAUCAGGUCUUUC 5' |
-12.80 | 35 | RIC-seq |
| chrX:139865645:139865685:[+] | chr12:65137044:65137071:[-] | nonBSJ supported | CDS |
circRNA 5': UCAAAUACAGAUCUUCCAGCUAAUCCAUGUCUUCCAGAAAA 3' ||||| || || ||| |||||||| target 3':GAGUUUCAACCU-GA-------------ACAUCAGGUCUUUC 5' |
-12.80 | 1 | RIC-seq |
| chrX:139865671:139865685:[+] | chr12:65137057:65137071:[-] | nonBSJ supported | CDS |
circRNA 5':AUGUCUUCCAGAAAA 3' ||| |||||||| target 3':AACAUCAGGUCUUUC 5' |
-12.80 | 1 | RIC-seq |
| Interaction region | CircRNA/target | Mutation ID | Position | Variant | Associated trait | Resource |
| chr12:65137044:65137071:[-] | target | 2696295 | chr12:65137046-65137047 | C>A | Mucopolysaccharidosis,_MPS-III-D | ClinVar |
| chr12:65137044:65137071:[-] | target | 1453303 | chr12:65137059-65137060 | G>T | Mucopolysaccharidosis,_MPS-III-D | ClinVar |
| chr12:65137057:65137071:[-] | target | 1453303 | chr12:65137059-65137060 | G>T | Mucopolysaccharidosis,_MPS-III-D | ClinVar |
| chr12:65137044:65137071:[-] | target | - | chr12:65137060-65137061 | T>C | LINC-JP | ICGC |
| chr12:65137057:65137071:[-] | target | - | chr12:65137060-65137061 | T>C | LINC-JP | ICGC |