Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139866341:139866346:[+] chr12:62749134:62749139:[+] nonBSJ supported CDS

circRNA 5':AGGAAA 3'


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target  3':ACCUUC 5'

 -4.50 3 RIC-seq
chrX:139866341:139866353:[+] chr12:62749127:62749139:[+] nonBSJ supported CDS

circRNA 5':AGGAAAUCCGUGU 3'


            |||| | ||:


target  3':ACCUUCUGUCAUU 5'

 -5.80 1 RIC-seq
chrX:139866411:139866415:[+] chr12:62749129:62749133:[+] nonBSJ supported CDS

circRNA 5':CCAGC 3'


            |||


target  3':UGUCA 5'

 -2.20 1 RIC-seq