Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139865532:139865550:[+] chr12:58020055:58020070:[-] nonBSJ supported 3UTR

circRNA 5':UCCAGCAAAUCCAGUCUUC 3'


            ||| ||| |||:


target  3':CGGU-GUUCAAG--AGAGA 5'

 -5.10 4 RIC-seq
chrX:139865534:139865549:[+] chr12:58020053:58020068:[-] nonBSJ supported 3UTR

circRNA 5':CAGCAAAUCCAG-UCUU 3'


            ||| | || |||:


target  3':CUCGGU--GUUCAAGAGA 5'

 -4.60 1 RIC-seq
chrX:139865534:139865550:[+] chr12:58020053:58020068:[-] nonBSJ supported 3UTR

circRNA 5':CAGCAAAUCCAG-UCUUC 3'


            ||| | || |||:


target  3':CUCGGU--GUUCAAGAGA 5'

 -5.00 1 RIC-seq