Gene structure and interaction sites

5'UTR

CDS

3'UTR

Exon

circRNA binding site

Detailed information

CircRNA interaction region	Target interaction region	Interaction type	Target element	RNA duplex	MFE (kcal/mol)	Reads	Methods
chrX:139866316:139866334:[+]	chr12:54974734:54974752:[-]	nonBSJ supported	CDS	circRNA 5':AGCUUCCGAAAAAUCCAGG 3' \|\|\|:\|\| \|\|\|\|\|\|\| target 3':CCGAGGGAACCUUAGGUCA 5'	-20.00	1	RIC-seq
chrX:139866320:139866353:[+]	chr12:54974726:54974754:[-]	nonBSJ supported	CDS	circRNA 5':UCCGAAAAAUCCAGGUCUUCCA-GGAAAUCC-GUGU 3' \|\|\|\| \|\| \|\|:\|\| \|\| \|\|\|\|\| \|\|\| target 3':UGGCUCAA-----CC-GAGGGAACC-UUAGGUCACC 5'	-20.70	21	RIC-seq

Variants map to interaction

Interaction region	CircRNA/target	Mutation ID	Position	Variant	Associated trait	Resource
chrX:139866316:139866334:[+]	circRNA	-	chrX:139866318-139866319	C>T	BTCA-JP	ICGC