Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139865341:139865402:[+] chr11:36323262:36323327:[+] nonBSJ supported Intron

circRNA 5':GUUUCCGAUGGCACCUGUGUCAAGGUCUUCCAACAACUCCG-------------GGUCUUCCAGCGACUUCAAGU 3'


            |||||:|| || | |||||||| ||||: | |||| || ::||||


target  3':AAAAGGUUAAGA--GAGAAUC--CCAGAAGGAC---GAGGUAACGUAAACUUAACGAGAAAGUAACC-GGGUUC 5'

 -32.10 1 RIC-seq
chrX:139865367:139865396:[+] chr11:36323294:36323326:[+] nonBSJ supported Intron

circRNA 5':CUUCCAACAA-CUCC--GGGUCUUCCAGCGACU 3'


            |||||| ||| ||||||||| || |


target  3':AAAGGUUAAGAGAGAAUCCCAGAAGGACGAGGU 5'

 -30.10 1 RIC-seq