Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139866360:139866394:[+] chr6:94044463:94044514:[-] nonBSJ supported Intron

circRNA 5':GCAAAUCCACGUCUUCCAA----------------CAAAGCCAUGUC-UUCC 3'


            |||||||||: ||| |||| |||| || |||


target  3':AGUUUAGGUGUUUAUAGUUCCAAUUUGCUCACUACGUUUAGGUAAAGUAAGA 5'

 -20.40 1 RIC-seq
chrX:139866383:139866403:[+] chr6:94044434:94044470:[-] nonBSJ supported Intron

circRNA 5':GCCAUGUC--------------UUCCA--UCAAAUUA 3'


            |||||: ||| ||||||:


target  3':AGGUACGUAAUAUUGAUCCGAUAAGACUGAGUUUAGG 5'

 -10.60 1 RIC-seq