Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139866051:139866069:[+] chr18:34367002:34367018:[-] nonBSJ supported CDS

circRNA 5':CGGAUAAUUUGGGUCUUCC 3'


            |:|:| |||||


target  3':ACUUGUGUAAA--AGAAGA 5'

 -7.70 1 RIC-seq
chrX:139866086:139866123:[+] chr18:34366984:34367018:[-] nonBSJ supported CDS

circRNA 5':CCAAAAAAGCCAUGUCUUCCAGAAAAUCCACA---UCUUCC 3'


            ||| ||||| || |||||| |||| |||||


target  3':AGUUG--UCGGU-CA-AAGGUCACUU--GUGUAAAAGAAGA 5'

 -23.30 26 RIC-seq
chrX:139866092:139866123:[+] chr18:34366988:34367018:[-] nonBSJ supported CDS

circRNA 5':AAGCCAUGUCUUCCAGAAAAUCCACA---UCUUCC 3'


            ||||| || |||||| |||| |||||


target  3':GUCGGU-CA-AAGGUCACUU--GUGUAAAAGAAGA 5'

 -23.10 1 RIC-seq
chrX:139866102:139866123:[+] chr18:34366997:34367018:[-] nonBSJ supported CDS

circRNA 5':UUCCAGAAAAUCCACA---UCUUCC 3'


            ||||| |||| |||||


target  3': AGGUCACUU--GUGUAAAAGAAGA 5'

 -12.80 17 RIC-seq
chrX:139866103:139866123:[+] chr18:34366998:34367018:[-] nonBSJ supported CDS

circRNA 5':UCCAGAAAAUCCACA---UCUUCC 3'


            |||| |||| |||||


target  3': GGUCACUU--GUGUAAAAGAAGA 5'

 -10.80 2 RIC-seq