5'UTR
CDS
3'UTR
Exon
circRNA binding site
| CircRNA interaction region | Target interaction region | Interaction type | Target element | RNA duplex | MFE (kcal/mol) | Reads | Methods |
| chrX:139866295:139866358:[+] | chr12:49332718:49332775:[-] | nonBSJ supported | CDS |
circRNA 5':CUUGUCUUCCC-UCAAAUCCAU------AGCUUCCGAAAAAUCCAGGUCUUCCAGGAAAUCCGUGUCUUCC 3' |||||| ||| || |||| ||:| |||| |||: |:|||| target 3':CGACAGACCGAAAGUGAAGAACAAAAACUCGACUAA---------CCGGUCGGUC----AGGUCCGGAAGC 5' |
-27.00 | 1 | RIC-seq |
| chrX:139866316:139866376:[+] | chr12:49332706:49332775:[-] | nonBSJ supported | CDS |
circRNA 5':AGCUUCCGAAAAAUCCAGGUCUUCCAGGAAAUCCGUGUCUU-----------------CCAGCAAAUCCACGUCUUCC 3' |||| |||| || || |||| ||||| |||| |:|||| target 3':ACGAAACAAUCCCGA---CAGA----CCGAAAGUGA-AGAACAAAAACUCGACUAACCGGUCGGUCAGGUCCGGAAGC 5' |
-28.00 | 1 | RIC-seq |
| Interaction region | CircRNA/target | Mutation ID | Position | Variant | Associated trait | Resource |
| chr12:49332706:49332775:[-] | target | - | chr12:49332749-49332750 | T>C | PACA-CA | ICGC |
| chr12:49332718:49332775:[-] | target | - | chr12:49332749-49332750 | T>C | PACA-CA | ICGC |
| chrX:139866295:139866358:[+] | circRNA | - | chrX:139866318-139866319 | C>T | BTCA-JP | ICGC |
| chrX:139866316:139866376:[+] | circRNA | - | chrX:139866318-139866319 | C>T | BTCA-JP | ICGC |
| chrX:139866316:139866376:[+] | circRNA | - | chrX:139866318-139866319 | C>T | BTCA-JP | ICGC |