Gene structure and interaction sites

5'UTR

CDS

3'UTR

Exon

circRNA binding site

Detailed information

CircRNA interaction region	Target interaction region	Interaction type	Target element	RNA duplex	MFE (kcal/mol)	Reads	Methods
chrX:139865993:139866001:[+]	chr11:9867168:9867175:[-]	nonBSJ supported	CDS	circRNA 5':UUCCAGUAA 3' \|\|\|\|\|:\| target 3': AGGUCGUC 5'	-9.50	4	RIC-seq
chrX:139866441:139866485:[+]	chr11:9879799:9879869:[-]	nonBSJ supported	CDS	circRNA 5':CGUCUUCCAAC----------AAAGGU-----ACGUCUUCCAACA-----------AAGGUAUGUCUUCCA 3' \|\|\|\|\|\|\| \|\|\|\|\| \|\| \| \|\|\|\| \|\| \|\|\|\|\| \|\|\|\|\|:\|\|\| target 3':ACAGAAGGAACCGACUCUCUAUUUCCCUCGCUUGGACAAGGACGUGACGUAACAUUUUCCA-ACAGAGGGUU 5'	-31.00	1	RIC-seq

Variants map to interaction

Interaction region	CircRNA/target	Mutation ID	Position	Variant	Associated trait	Resource
chr11:9879799:9879869:[-]	target	1323552	chr11:9879818-9879819	A>C	Charcot-Marie-Tooth_disease_type_4\|Charcot-Marie-Tooth_disease_type_4B2	ClinVar