Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139866632:139866664:[+] chr1:156933037:156933065:[-] nonBSJ supported CDS

circRNA 5': AUCUCCAGGGCUUCCAGCAUCUGCUC-GUCUUCC 3'


            |:|:||||| ||| ||: | ||||


target  3':UUGGGGGUCCAC----UCGAC--CGGCUCUGAAGU 5'

 -20.00 3 RIC-seq
chrX:139866632:139866673:[+] chr1:156933037:156933072:[-] nonBSJ supported CDS

circRNA 5': AUCUCCAGGGCUUCCAGCAUCUGCUC-GUCUUCCAACAUCUCC 3'


            |:|:||||| ||| ||: | |||| ||||


target  3':UUGGGGGUCCAC----UCGAC--CGGCUCUGAAGUCAA-AGAG 5'

 -23.20 15 RIC-seq