Gene structure and interaction sites

5'UTR

CDS

3'UTR

Exon

circRNA binding site

Detailed information

CircRNA interaction region	Target interaction region	Interaction type	Target element	RNA duplex	MFE (kcal/mol)	Reads	Methods
chrX:139865915:139865963:[+]	chr20:11906839:11906880:[+]	nonBSJ supported	3UTR	circRNA 5':CAGGUCUUCCAGCCAAUAUAUGUCUUCCUGAAGAUCCACGUCUUCCAGA 3' \|:\| \|\| \|\|\|\|\|\|\| \|\|\|:\|\| :\|\|\| \|:\|\|\| \|\|\| target 3':UUUCUGACGGUCGGUC-UAUGCAACCCCUUUUC-----GUAGAU-GUCA 5'	-27.40	1	RIC-seq
chrX:139865915:139865974:[+]	chr20:11906829:11906880:[+]	nonBSJ supported	3UTR	circRNA 5':CAGGUCUUCCAGCCAAUAUAUGUCUUCCUGAAGAUCCACGUCUUCCAGAAAAUCCAUGUC 3' \|:\| \|\| \|\|\|\|\|\|\| \|\|\|:\|\| :\|\|\| \|:\|\|\| \|\|\| \|\|: target 3':UUUCUGACGGUCGGUC-UAUGCAACCCCUUUUC-----GUAGAU-GUCACAUAAG-ACGA 5'	-27.90	1	RIC-seq