Gene structure and interaction sites

5'UTR

CDS

3'UTR

Exon

circRNA binding site

Detailed information

CircRNA interaction region	Target interaction region	Interaction type	Target element	RNA duplex	MFE (kcal/mol)	Reads	Methods
chrX:139866377:139866409:[+]	chr17:73820396:73820430:[+]	nonBSJ supported	CDS	circRNA 5':AACAAAGC-CA-UGUCUUC-CAUCAAAUUAAUGUCU 3' \|\|\| \|\|\| \|\| :\|\| \|\|: \|\|:\| target 3':GUGUGUCGCGUCGCACAACCGUGCCGUCGUGACGG 5'	-10.90	2	RIC-seq
chrX:139866382:139866393:[+]	chr17:73820441:73820475:[+]	nonBSJ supported	CDS	circRNA 5':AGCCA----------------------UGUCUUC 3' \|\|\|\| \|\|:\|:\|\| target 3':CCGGUCCGACCGUCUACCCCGUGAGCGACGGGAGU 5'	-10.10	1	RIC-seq
chrX:139866382:139866394:[+]	chr17:73820441:73820475:[+]	nonBSJ supported	CDS	circRNA 5':AGCCA----------------------UGUCUUCC 3' \|\|\|\| \|\|:\|:\|\| target 3':CCGGUCCGACCGUCUACCCCGUGAGCGACGGGAGU 5'	-10.90	1	RIC-seq
chrX:139866382:139866394:[+]	chr17:73820442:73820475:[+]	nonBSJ supported	CDS	circRNA 5':AGCCA----------------------UGUCUUCC 3' \|\|\|\| \|\|:\|:\|\| target 3':CCGGUCCGACCGUCUACCCCGUGAGCGACGGGAG 5'	-10.90	5	RIC-seq
chrX:139866382:139866411:[+]	chr17:73820441:73820475:[+]	nonBSJ supported	CDS	circRNA 5':AGCCAUGUCUUCCAUCAA---AUUAA-UGUCUUC 3' \|\|\|\| \|: \|:\| \|\|:\|:\|\| target 3':CCGGUCCGACCGUCUACCCCGUGAGCGACGGGAGU 5'	-12.20	24	RIC-seq