5'UTR
CDS
3'UTR
Exon
circRNA binding site
| CircRNA interaction region | Target interaction region | Interaction type | Target element | RNA duplex | MFE (kcal/mol) | Reads | Methods |
| chrX:139865715:139865772:[+] | chr4:74019672:74019717:[-] | nonBSJ supported | CDS |
circRNA 5':CCAGUAAAUCUAGUU-CUUCCAGAAAAAUCUAGAUCUUCCAGUCAAUCAGUGUCUUCCA 3' |||: ||||| |:| |||||| | ||:|| ||||||| |||||| target 3':CGUCG-UUAGACCGAUGAAGGUGUAC--AGGUCGUGAAGGUC-----------GAAGGUA 5' |
-41.40 | 1 | RIC-seq |
| chrX:139865715:139865773:[+] | chr4:74019672:74019717:[-] | nonBSJ supported | CDS |
circRNA 5':CCAGUAAAUCUAGUU-CUUCCAGAAAAAUCUAGAUCUUCCAGUCAAUCAGUGUCUUCCAG 3' |||: ||||| |:| |||||| | ||:|| ||||||| |||||| target 3':CGUCG-UUAGACCGAUGAAGGUGUAC--AGGUCGUGAAGGUC-----------GAAGGUA 5' |
-41.90 | 1 | RIC-seq |
| chrX:139866201:139866248:[+] | chr4:73959807:73959847:[-] | nonBSJ supported | CDS |
circRNA 5':AAUCCGGGUCUUCCAGGAAAUCCGUGUCUUCCAGCAAGUCCACGUCUU 3' |||| |||| ||||| |||||| :|| :||| target 3':AUAGG-CCAG-AGGUCAGA-----ACAGAAAGACAAAUAGUUAUAGAU 5' |
-25.80 | 1 | RIC-seq |
| chrX:139866214:139866248:[+] | chr4:73959800:73959833:[-] | nonBSJ supported | CDS |
circRNA 5':CAG-GAA-AUCCGUGUCUUCCAG-CAAGUCCACGUCUU 3' || || ||||| ||| ||||| | ||| ||| target 3':AUCACUAAUAGGC-CAG-AGGUCAGAACAGAA--AGAC 5' |
-22.50 | 1 | RIC-seq |
| chrX:139866730:139866756:[+] | chr4:74012489:74012520:[-] | nonBSJ supported | CDS |
circRNA 5':AGUCUUCCAU--------CAACUGGCUCAAUAUCC 3' |:|| || || || ||| |:||| target 3':GCGGACGGACUUCAUUCUGUAGA-CGA--UGUAGU 5' |
-10.10 | 2 | RIC-seq |
| chrX:139865418:139865429:[+] | chr4:74061062:74061077:[-] | nonBSJ supported | Intron |
circRNA 5':AGGUCUUC----CAGA 3' |||||| ||| target 3':ACCAGAACCAUAGUCC 5' |
-8.90 | 2 | RIC-seq |