Gene structure and interaction sites

5'UTR

CDS

3'UTR

Exon

circRNA binding site

Detailed information

CircRNA interaction region	Target interaction region	Interaction type	Target element	RNA duplex	MFE (kcal/mol)	Reads	Methods
chrX:139865742:139865797:[+]	chr1:146627856:146627934:[-]	nonBSJ supported	3UTR	circRNA 5':UCUAGAUCUUCCAGUCAAUCA-----------------GUGUCUUC--CAGAAAGAAAUCCAGGUCU-------UCCAGUCA 3' \|\|\| \|\| :\|\|\|:\| :\|\|\|\|\|\|\| \|\| :\|\|\|\|:\| :\|\|\|\|\|\| target 3': GAUAAAG-GGGUUAAUUUUCGUUCCUCAAGAUAAUCAUACAGAAGAAGUAAAUAUA-GGGUCUAAUUAUAUUUGGGUCAGA 5'	-28.90	22	RIC-seq
chrX:139865749:139865797:[+]	chr1:146627861:146627934:[-]	nonBSJ supported	3UTR	circRNA 5':CUUCCAGUCAAUCA-----------------GUGUCUUC--CAGAAAGAAAUCCAGGUCU-------UCCAGUCA 3' \|:\|\|\|:\| :\|\|\|\|\|\|\| \|\| :\|\|\|\|:\| :\|\|\|\|\|\| target 3':AGGGGUUAAUUUUCGUUCCUCAAGAUAAUCAUACAGAAGAAGUAAAUAUA-GGGUCUAAUUAUAUUUGGGUCAGA 5'	-27.20	3	RIC-seq