Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139865380:139865393:[+] chr20:33515398:33515409:[+] nonBSJ supported 3UTR

circRNA 5':CGGGUCUUCCAGCG 3'


            |||: ||


target  3':UCCCGUUCA--CGU 5'

 -6.90 1 RIC-seq
chrX:139865380:139865401:[+] chr20:33515390:33515409:[+] nonBSJ supported 3UTR

circRNA 5':CGGGUCUUCCAGCGACUUCAAG 3'


            |||: ||: ::|||


target  3':UCCCGUUCA--CGUACGGGUUA 5'

 -8.40 1 RIC-seq