5'UTR
CDS
3'UTR
Exon
circRNA binding site
| CircRNA interaction region | Target interaction region | Interaction type | Target element | RNA duplex | MFE (kcal/mol) | Reads | Methods |
| chrX:139865503:139865555:[+] | chr6:150005523:150005582:[-] | nonBSJ supported | CDS |
circRNA 5':AGCUCCAAGUCUUCCAGUAAAUCAAGUCUUCCAGCAAAU---------CCAGUCUUCCAG-CA 3' |||| |||: || ||| |:||||| |||| ||||| || target 3':GUGAGAGACAGGCAACGAUCCCACUC-GAAC-UUGUUUACGACUAUAUGGUCU--AGGUCUGUU 5' |
-22.30 | 37 | RIC-seq |
| chrX:139865528:139865555:[+] | chr6:150005547:150005582:[-] | nonBSJ supported | CDS |
circRNA 5': GUCUUCCAGCAAAU---------CCAGUCUUCCAG-CA 3' | ||| |:||||| |||| ||||| || target 3':UC-GAAC-UUGUUUACGACUAUAUGGUCU--AGGUCUGUU 5' |
-14.60 | 1 | RIC-seq |
| chrX:139865532:139865548:[+] | chr6:150005568:150005581:[-] | nonBSJ supported | CDS |
circRNA 5':UCCAGCAAAUCCAGUCU 3' |||| |||||| | target 3':UGGUC---UAGGUCUGU 5' |
-13.20 | 1 | RIC-seq |
| chrX:139866526:139866539:[+] | chr6:150005268:150005280:[-] | nonBSJ supported | CDS |
circRNA 5':AGCCAUGUCU-UCCA 3' ||| | ||| ||| target 3': CGG-AGAGACAGGA 5' |
-10.60 | 1 | RIC-seq |
| chrX:139866635:139866680:[+] | chr6:150005568:150005603:[-] | nonBSJ supported | CDS |
circRNA 5':UCCAGGGCUUCCAG-CAUCUGCUCGUCUUCCAACAUCUCCACGUCUU 3' ||||: ||||| || ||||||| |||||| |||| target 3':UGGUCU---AGGUCUGUUUC----CAGAAGGAUGUAGA----CAGAC 5' |
-32.70 | 19 | RIC-seq |