5'UTR
CDS
3'UTR
Exon
circRNA binding site
| CircRNA interaction region | Target interaction region | Interaction type | Target element | RNA duplex | MFE (kcal/mol) | Reads | Methods |
| chrX:139865775:139865808:[+] | chr6:152652130:152652170:[-] | nonBSJ supported | CDS |
circRNA 5':AAGAAAUCCAGG-UCUUC-C-AG-UC----AAUCAGUGUCUU 3' ||||| |||:: ||||| | || || ||:| ||| || target 3':AUCUUU-GGUUUAAGAAGAGAUCAAGAACAUUGGCCACUGAC 5' |
-20.00 | 15 | RIC-seq |
| chrX:139865814:139865845:[+] | chr6:152652130:152652159:[-] | nonBSJ supported | CDS |
circRNA 5':AAGAAAUCCAGG-UCUUCCAGUC-AGUCAGUGUC 3' ||||| |||:: ||||| || ||| ||| target 3':AUCUUU-GGUUUAAGAAG---AGAUCAAGAACAU 5' |
-16.00 | 15 | RIC-seq |
| chrX:139865864:139865884:[+] | chr6:152558024:152558044:[-] | nonBSJ supported | CDS |
circRNA 5':CUUCCACCAAAUCCAG--GUCUU 3' |||||||| ||||| |||| target 3': AAGGUGGUGGAGGUCGACAGA 5' |
-24.20 | 1 | RIC-seq |
| chrX:139866058:139866102:[+] | chr6:152771783:152771819:[-] | nonBSJ supported | CDS |
circRNA 5': UUUGGGUCUUCC-UGAAAAUCUACGUCUUCCAAAAAA-GCCAUGUCU 3' |:|||||||||| ||| | ||||| || |||| target 3':CAGACCCAGAAGGUACU--------C-GAAGGACAUCCACG--ACAGU 5' |
-30.30 | 21 | RIC-seq |