Gene structure and interaction sites

5'UTR

CDS

3'UTR

Exon

circRNA binding site

Detailed information

CircRNA interaction region	Target interaction region	Interaction type	Target element	RNA duplex	MFE (kcal/mol)	Reads	Methods
chrX:139866083:139866122:[+]	chr6:149842203:149842253:[-]	nonBSJ supported	CDS	circRNA 5':CUUCCAAAAAAGCCA-UGUCUUCCAG------AAAAUCCACA-----UCUUC 3' \|\|\|\|\| \|:\|\| \|\| \| \|\| \|\|\|\|\|\|\|\|\|\| \|\|\|\|\| target 3':AAAGGUAAA-UUGGAAAC-GUUGGCUGACCGAUUUUAGGUGUACAUAAGAAGA 5'	-23.50	1	RIC-seq
chrX:139866085:139866122:[+]	chr6:149842213:149842253:[-]	nonBSJ supported	CDS	circRNA 5':UCCAAAAAAGCCAUGUCUUCCAGAAAAUCCACA-----UCUUC 3' \|\| \|:\|\| \| \|\| \|\|\|\|\|\|\|\|\|\| \|\|\|\|\| target 3':UGGAAACGUUGG--CUGACCGA-UUUUAGGUGUACAUAAGAAGA 5'	-19.30	1	RIC-seq
chrX:139866451:139866486:[+]	chr6:149847860:149847912:[-]	nonBSJ supported	CDS	circRNA 5': CAAA-GGUACGUCUUCCAACAA---------------AGGUAUGUCUUCCAA 3' \|\|\|\| :\|\|\|\|:\| \|\|\| \|\|\|\|\| \|\|\|\|:\|\|\| target 3':UGUUUGUCAUGUAAAAGACCUCCAAAUUAUAGACGUAGUCCAUCCAGAGGGUG 5'	-25.80	2	RIC-seq