Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139865432:139865447:[+] chr19:10227845:10227863:[-] nonBSJ supported CDS

circRNA 5':AUCCUGAGCU---UCCAGA 3'


            |||:||:|| |||||


target  3':AAGGGCUUGAAGAAGGUCA 5'

 -19.80 13 RIC-seq
chrX:139865432:139865465:[+] chr19:10227845:10227863:[-] nonBSJ supported CDS

circRNA 5':AUCCUGAGCUUCCAGAAAAUCCACAUCUUCCAGA 3'


            |||:||:|| ||||||||


target  3':AAGGGCUUGA---------------AGAAGGUCA 5'

 -23.00 21 RIC-seq