Gene structure and interaction sites

5'UTR

CDS

3'UTR

Exon

circRNA binding site

Detailed information

CircRNA interaction region	Target interaction region	Interaction type	Target element	RNA duplex	MFE (kcal/mol)	Reads	Methods
chrX:139865505:139865567:[+]	chr19:10230516:10230562:[-]	nonBSJ supported	5UTR	circRNA 5':CUCCAAGUCUUCCAGUAAAUCAAGUCUUCCAGCAAAUCCAGUC--UUCCA-GCAAUUACUGGUCUU 3' \|\| \|\|\|\|\| \|\|\|\|\|\|\| :\|\| \|\|\|\|\| \|\|\| :\|\|\|\| \|\| :\|:\|: target 3': AGUUUCAG-AGGUCAUCCG---UAG-----CGUUUU--UCAUAAGAGGUGCG-------UCGGGU 5'	-28.60	1	RIC-seq
chrX:139865527:139865573:[+]	chr19:10230331:10230366:[-]	nonBSJ supported	CDS	circRNA 5':AGUCUUCCAGCAAAUCCAGUCUUCCAGCAAUUACUGGUCU-UCCACCA 3' \|\|\|:\|\|\| \|\|\| \|\|:\|\|\|\| \| \|\|\|\|\|\| :\|\|\| \| target 3': CAGGAGGGGG---AGG--AGGAGGU-G-----GACCAGCCGGGUUGA 5'	-32.00	1	RIC-seq