Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139866204:139866245:[+] chr12:122825557:122825604:[-] nonBSJ supported CDS

circRNA 5':CCGGGUCUUCCA--------GGAAAUCCGUGUCUUCCAGCAA-GUCCACGU 3'


            || |||||||| :|| | |||||| || ||||| ||


target  3':UGCACAGAAGGUAAAGAUGCUCUACGA-C-CAGAAGA-CGAAACAGGU-CAA 5'

 -27.60 2 RIC-seq
chrX:139866205:139866222:[+] chr12:122862351:122862368:[-] nonBSJ supported CDS

circRNA 5':CGGGUC-UUCCAGGAAAUC 3'


            |||| :||||:||||:


target  3':ACCCAAAGAGGUUCUUUG 5'

 -18.80 2 RIC-seq