Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139865461:139865491:[+] chr19:10754761:10754785:[+] nonBSJ supported 3UTR

circRNA 5':CCAGACAAU--CCAUGUCUUCCGGACAAUCCAU 3'


            ||| |||| ||:|| ||||


target  3':UGUCGAUAAUCGGUAGAGGAG-------AGGU 5'

 -15.50 1 RIC-seq
chrX:139865461:139865510:[+] chr19:10754748:10754785:[+] nonBSJ supported 3UTR

circRNA 5':CCAGACAAU--CCAUGUCUUCCGGACAAUCCAUGUCUUCCAAGAAGCUCCAA 3'


            ||| |||| ||:|| |||| |:|| |||||


target  3':UGUCGAUAAUCGGUAGAGGAG-------AGGU-CGGACGA------GAGGUG 5'

 -24.40 1 RIC-seq