Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139865346:139865386:[+] chr11:17796992:17797009:[+] nonBSJ supported Intron

circRNA 5':CGAUGGCACCUGUGUCAAGGUCUUCCAACAACUCCGGGUCU 3'


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target  3':ACUAUGG-GGA---------------------GGGUCCUG 5'

 -14.90 2 RIC-seq
chrX:139865863:139865890:[+] chr11:17795355:17795386:[+] nonBSJ supported Intron

circRNA 5':UCUUC-CACCAAA---UCCAGGUCUU-C-CAGUC 3'


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target  3':GGACGAGUGGACCGUGAGGA--AGAAUGAGUCAC 5'

 -14.20 4 RIC-seq