Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139866051:139866101:[+] chr15:52844236:52844273:[-] nonBSJ supported CDS

circRNA 5':CGGAUAA--UUUGGGUCUUCCUGAAAAUCUACGUCUUCCAAAAAAGCCAUGUC 3'


            ||| :||| ||||| || ||||||||


target  3':UCCUUCAACGAACA-AGAAGUAAAAAC-GAAA------------UCGGUACA 5'

 -15.30 1 RIC-seq
chrX:139866051:139866101:[+] chr15:52844236:52844274:[-] nonBSJ supported CDS

circRNA 5':CGGAUAA--UUUGGGUCUUCCUGAAAAUCUACGUCUUCCAAAAAAGCCAUGUC 3'


            ||| :||| ||||| || ||||||||


target  3':UCCUUCAACGAACA-AGAAGUAAAAAC-GAAA------------UCGGUACAA 5'

 -15.90 33 RIC-seq
chrX:139866525:139866534:[+] chr15:52844265:52844274:[-] nonBSJ supported CDS

circRNA 5':AAGCCAUGUC 3'


            ||||||||


target  3':AUCGGUACAA 5'

 -12.90 1 RIC-seq