Gene structure and interaction sites

5'UTR

CDS

3'UTR

Exon

circRNA binding site

Detailed information

CircRNA interaction region	Target interaction region	Interaction type	Target element	RNA duplex	MFE (kcal/mol)	Reads	Methods
chrX:139865794:139865842:[+]	chr15:43034857:43034911:[-]	nonBSJ supported	3UTR	circRNA 5': GUCAAUCAGUGUCUUC--------CAGAAAGAAAUCCAGGUCUUCCAGUCAG-UCAGU 3' \|\| \|\|:\|\|\|: \|\|\| \|\|\| \|\|\|\|\|\| \|\|\|\|\|\| \|\|\|: target 3':CCA-UUGGUCGAU-AAGACAACACUGUC-UUCUUU-GGUCCAUUAUGAACUAAAAGUUU 5'	-24.60	1	RIC-seq
chrX:139865800:139865842:[+]	chr15:43034862:43034911:[-]	nonBSJ supported	3UTR	circRNA 5': CAGUGUCUUC--------CAGAAAGAAAUCCAGGUCUUCCAGUCAG-UCAGU 3' \|\|\|: \|\|\| \|\|\| \|\|\|\|\|\| \|\|\|\|\|\| \|\|\|: target 3':GGUCGAU-AAGACAACACUGUC-UUCUUU-GGUCCAUUAUGAACUAAAAGUUU 5'	-21.60	1	RIC-seq
chrX:139865381:139865409:[+]	chr15:43120126:43120142:[-]	nonBSJ supported	CDS	circRNA 5':GGGUCUUCCAGCGACUUCAAGUCUUCCAA 3' \|\|\|\|\| \|\|\| \|\|\| \|\|\| target 3':ACCAGA------CUG-----CAGU-GGUG 5'	-11.80	1	RIC-seq