Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139865521:139865568:[+] chr2:192242125:192242182:[+] nonBSJ supported Intron

circRNA 5':AAAUC-AAGUCUUCCAGCAAAUCCAGUC------------UUCCAGCAAUUACUGGUCUUC 3'


            |||| ||||| ||||| ||| ::|||| ||| ||| :|||:


target  3': UUAGUUUCAG-AGGUCUUCUCCUUCACCCGUCCUUGAACGGGGUCCUUACUGAGUAGAG 5'

 -27.80 2 RIC-seq
chrX:139866250:139866288:[+] chr2:192227891:192227932:[+] nonBSJ supported Intron

circRNA 5':CAACAAAGCCAUGUCU-----UC--CAGACUAUCCAUGUCUUCCAG 3'


            ||||||: ||||||: || |||||||| || ||||||


target  3':UUUGUUUUAGUACAGGUCCCUAGUUGUCUGAUA---AC-GAAGGUA 5'

 -30.90 2 RIC-seq