Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139866627:139866642:[+] chr7:128505837:128505848:[+] nonBSJ supported 3UTR

circRNA 5':CCAGCAUCUCCAGGGC 3'


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target  3':UGUCGU----GUCCCU 5'

 -13.80 1 RIC-seq
chrX:139866628:139866652:[+] chr7:128505841:128505872:[+] nonBSJ supported 3UTR

circRNA 5':CAGCAUCUCCAG-GGCUUC------CAGCAUC 3'


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target  3':AUUGUAGUUGUUACUGUGACACAUUGUCGUGU 5'

 -15.60 28 RIC-seq
Variants map to interaction
Interaction region CircRNA/target Mutation ID Position Variant Associated trait Resource
chr7:128505837:128505848:[+] target - chr7:128505844-128505845 G>C LICA-CN ICGC
chr7:128505841:128505872:[+] target - chr7:128505844-128505845 G>C LICA-CN ICGC