Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139865431:139865446:[+] chr22:32353550:32353565:[+] nonBSJ supported 3UTR

circRNA 5':AAUCC--UGAGCUUCCAG 3'


            |:|| |||: |||||


target  3':AUGGGUAACUU-AAGGU 5'

 -11.00 1 RIC-seq
chrX:139865431:139865449:[+] chr22:32353546:32353565:[+] nonBSJ supported 3UTR

circRNA 5':AAUCC--UGAGCUUCCAGAAA 3'


            |:|| |||: |||||:||


target  3':AUGGGUAACUU-AAGGUUUUG 5'

 -13.80 22 RIC-seq
chrX:139865934:139865951:[+] chr22:32352207:32352227:[+] nonBSJ supported CDS

circRNA 5': AUG-UCUUCCU-GAAGAUCC 3'


            ||| :|:||| |||||||


target  3':UUACUGGGAGGUCCUUCUAGC 5'

 -18.20 2 RIC-seq
chrX:139865934:139865957:[+] chr22:32352205:32352227:[+] nonBSJ supported CDS

circRNA 5': AUG-UCUUCCU-GAAGAUCCACGUCU 3'


            ||| :|:||| ||||||| |:|


target  3':UUACUGGGAGGUCCUUCUAG---CGG 5'

 -19.10 24 RIC-seq