Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139866058:139866083:[+] chr1:19415415:19415434:[-] nonBSJ supported CDS

circRNA 5':UUUGGGUCUUCCUGAAAAUCUACGUC 3'


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target  3':UGACCU-GU-GGACG---AGGU-CGA 5'

 -10.20 19 RIC-seq
chrX:139866634:139866649:[+] chr1:19415365:19415381:[-] nonBSJ supported CDS

circRNA 5': CUC-CAGGGCUUCCAGC 3'


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target  3':AGGGCGUCCCGAAGGUC 5'

 -27.60 22 RIC-seq
chrX:139866634:139866658:[+] chr1:19415365:19415391:[-] nonBSJ supported CDS

circRNA 5': CUC-CAGGGCUUCCAGCAUCUGCUCG 3'


            |:| |||||||||||||| |||


target  3':AGGGCGUCCCGAAGGUCGUCCAAGAGA 5'

 -36.40 16 RIC-seq
chrX:139866636:139866658:[+] chr1:19415367:19415391:[-] nonBSJ supported CDS

circRNA 5': C-CAGGGCUUCCAGCAUCUGCUCG 3'


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target  3':GGCGUCCCGAAGGUCGUCCAAGAGA 5'

 -33.00 1 RIC-seq