Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139865914:139865929:[+] chr19:50189372:50189386:[+] nonBSJ supported CDS

circRNA 5':CCAGGUCUUCCAGCCA 3'


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target  3':AGUCCAGAAGGU-GGA 5'

 -23.50 3 RIC-seq
chrX:139866600:139866634:[+] chr19:50186439:50186459:[+] nonBSJ supported Intron

circRNA 5':CCAUGUCUUCCUAUAUCUCCAGGUCUUC-CAGCAUC 3'


            ||:|:|| || || |||||:


target  3':AGUGCGGA--------------CAUUAGAGUCGUG 5'

 -16.00 2 RIC-seq