Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139865516:139865565:[+] chr14:104174937:104174987:[-] nonBSJ supported CDS

circRNA 5':CCAGUAAA-UCAAGUCU--UCCAGCAAAUCCAGU--CUUCCAGCAAUUACUGGUC 3'


            |||| |||||||| ||||| ||| |:||| ||||:|:|


target  3':AGUCAGAGAAGUUCAGACCAGGUCUUUUCACAUUUUGGAGGA----AAUGGCUAA 5'

 -31.50 2 RIC-seq