Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139865794:139865848:[+] chr3:50392899:50392954:[-] nonBSJ supported CDS

circRNA 5': GUCA--AUCAGUGUCUU-CCAGAAAGAAAUCCAGGUCUUCCAGUCAG-UCAGUGUCUUC 3'


            |||| ||| :||: ||||| || ||||||||| || ||||: ||:


target  3':GUAGUAGUAGGUACGACCCGGUCUACCUGA----CCAGAAGGUGAGAGAAGUCGGCGAGU 5'

 -39.30 2 RIC-seq